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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3569550_3569933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3569550 - 3569933

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

AGCCCCGCAGGC

Flanking Amino Acid:

RSINEEIHTQFLDHLLTGIE

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

80.7

0.69

0.7

73.1

31.8

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

34.1

-1.2

2.2

39.18

39.4

Associated Gene:

Gene:

SLC9A1

Ensembl Gene ID:

ENSAPLG00000016147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016880

3544977 - 3574364

29388