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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3570005_3570441_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3570005 - 3570441

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

TGTTTCTTCCCC

Flanking Amino Acid:

GHYGHHHWKDKLNRFNKKYV

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

55.9

0.15

1.2

Major PPT

53.5

0.08

1.2

56.3

39.1

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

43.8

-0.4

3.6

70.25

41.4

Associated Gene:

Gene:

SLC9A1

Ensembl Gene ID:

ENSAPLG00000016147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016880

3544977 - 3574364

29388