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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3570616_3570763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3570616 - 3570763

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTTCT

5'SS Class:

major

3'SS Sequence:

TCTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TGACTCTGAATC

Flanking Amino Acid:

IPSAVSTVSIQNINPKNVPV

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

71.6

34.4

Major BPS

69.8

0.49

37.5

Major PPT

83.2

0.75

0.8

77.1

31.6

Minor 5ss

39.6

-1.2

2.9

56.3

41.9

Minor BPS

0.17

1.4

62.42

36.4

Associated Gene:

Gene:

SLC9A1

Ensembl Gene ID:

ENSAPLG00000016147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016880

3544977 - 3574364

29388