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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3570879_3571303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3570879 - 3571303

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCGT

5'SS Class:

major

3'SS Sequence:

GGCATTTTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AGGTTTTTAACC

Flanking Amino Acid:

RNNLQKTRQRLRSYNRHTLV

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

70.1

0.45

60.8

44.6

Minor 5ss

-2.1

3.4

39.3

Minor BPS

68.6

0.56

1.2

68.77

36.8

Associated Gene:

Gene:

SLC9A1

Ensembl Gene ID:

ENSAPLG00000016147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016880

3544977 - 3574364

29388