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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3571406_3571701_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3571406 - 3571701

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATGGAGG

5'SS Class:

weak_major

3'SS Sequence:

ACTCTCATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTCCCCTGCACT

Flanking Amino Acid:

RQKARQMERSKPTYLTVPAH

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.2

49.9

46.1

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

77.1

0.61

0.9

70.3

34.2

Minor 5ss

39.7

-1.2

3.1

48.6

47.4

Minor BPS

50.1

0.08

70.08

46.5

Associated Gene:

Gene:

SLC9A1

Ensembl Gene ID:

ENSAPLG00000016147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016880

3544977 - 3574364

29388