Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3611881_3613796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3611881 - 3613796

Intron Length:

1916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TCTCGTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

CTTTGTTTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.3

72.6

38.9

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

81.4

0.71

0.8

72.9

37.4

Minor 5ss

36.7

-1.5

2.9

50.4

39.3

Minor BPS

65.2

0.56

1.8

82.48

39.6

Associated Gene:

Gene:

KDF1

Ensembl Gene ID:

ENSAPLG00000010691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011127

3611716 - 3616655

4940