Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3626326_3626652_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3626326 - 3626652

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TCGATGTTGATA

Flanking Amino Acid:

TKKINPENSKLSDLDSETRS

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.9

0.65

0.9

75.9

Minor 5ss

37.8

-1.4

51.4

38.8

Minor BPS

45.3

-0.3

53.43

39.8

Associated Gene:

Gene:

NUDC

Ensembl Gene ID:

ENSAPLG00000010698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011174

3624348 - 3632989

8642