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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3642406_3642520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3642406 - 3642520

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGTCCACCAACT

Flanking Amino Acid:

QIGTFERYTKGFGRKVLEQQ

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

69.1

0.47

60.7

37.6

Major PPT

80.5

0.69

0.7

72.6

32.1

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

47.6

-0.1

2.1

73.49

42.1

Associated Gene:

Gene:

GPATCH3

Ensembl Gene ID:

ENSAPLG00000010745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011188

3638815 - 3643770

4956