Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3651811_3652000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3651811 - 3652000

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

ATTGCCTTCAGA

Flanking Amino Acid:

MDLIEQYGKLAFNLDYYTEV

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.5

35.6

Major BPS

73.5

0.59

81.3

29.9

Major PPT

0.76

0.8

78.1

30.7

Minor 5ss

30.3

-2.3

3.3

33.4

Minor BPS

52.3

0.07

2.2

69.2

43.4

Associated Gene:

Gene:

GPN2

Ensembl Gene ID:

ENSAPLG00000010758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011215

3648771 - 3653651

4881

ENSAPLT00000027539

3648771 - 3653928

5158