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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3653071_3653578_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

3653071 - 3653578

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

AGTGTGTTATCAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TTTTCCTTAATT

Flanking Amino Acid:

AAVGADFHFTSTLAVQEKYV

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

47.9

-0.1

1.4

49.4

42.4

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

66.3

0.37

1.1

63.1

46.7

Minor 5ss

90.3

1.36

0.9

24.7

Minor BPS

95.9

1.52

0.5

104

16.3

Associated Gene:

Gene:

GPN2

Ensembl Gene ID:

ENSAPLG00000010758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011215

3648771 - 3653651

4881

ENSAPLT00000027539

3648771 - 3653928

5158