About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3668481_3668904_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3668481 - 3668904

Intron Length:
424

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAC|GTGAGTACC

5'SS Class:
major

3'SS Sequence:
TTGTCTCTGTCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGGGCAA

U12 Branch Point Sequence:
TCCCGCGAGACC

Flanking Amino Acid:
VASNLTTNEDFLVSSKQMMC

Intron Amino Acid Position:
360

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.5
0.6
1.2
74.9
35.3

Major BPS
44.3
-0.3
1.5
49.1
46.3

Major PPT
77.3
0.61
1
77.4
36.9

Minor 5ss
32.9
-1.9
2.6
37.5
32.2

Minor BPS
37.1
-1
2.4
46.29
43.5

Associated Gene:

Gene:
ZDHHC18

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3663697 - 3677098
13402