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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3691093_3691398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3691093 - 3691398

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTATATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATATTACAG

Flanking Amino Acid:

QRRRLTAKDIGTPEAWRVMM

Intron Amino Acid Position:

1276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

67.9

37.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.6

0.69

0.9

73.6

40.4

Minor 5ss

29.9

-2.3

3.3

35.5

43.1

Minor BPS

46.3

-0.4

58.27

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120