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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3691640_3691777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3691640 - 3691777

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAACCAC

5'SS Class:

major

3'SS Sequence:

TCACATTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCACAT

U12 Branch Point Sequence:

GCATGCAGAATC

Flanking Amino Acid:

TDEILHSEQRVSSPAPLPRP

Intron Amino Acid Position:

1150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

56.5

42.9

Major BPS

68.9

0.47

Major PPT

72.1

0.5

0.9

69.2

36.3

Minor 5ss

37.1

-1.5

3.1

Minor BPS

42.7

-0.5

49.87

40.4

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108