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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3692273_3693688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3692273 - 3693688

Intron Length:

1416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCATCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

ATAATCTCACCT

Flanking Amino Acid:

QTTMYQQQQQNYKRPMDGSY

Intron Amino Acid Position:

985

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.4

32.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

81.4

0.71

0.8

75.1

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

48.7

-0

1.8

68.14

42.3

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120