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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3693786_3693893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3693786 - 3693893

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

AGAAAAATAACG

Flanking Amino Acid:

RYPQQQQQQQRHDSYGNQFS

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

64.9

41.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

80.6

0.69

0.7

73.4

31.6

Minor 5ss

32.7

-2

3.1

40.1

Minor BPS

-0.8

1.9

44.5

39.8

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120