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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3694026_3694152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3694026 - 3694152

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTGTTTCCATG

Flanking Amino Acid:

YPYGGPYDRVRTEPGMGPEG

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

80.5

33.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

79.8

0.67

0.9

74.5

35.4

Minor 5ss

31.5

-2.1

42.7

44.3

Minor BPS

44.1

-0.6

54.05

42.3

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120