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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3694655_3695025_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3694655 - 3695025

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTAATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

HSQMPPLPGIRSNSVGLQDA

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

68.6

36.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

84.6

0.78

0.9

86.5

31.5

Minor 5ss

32.1

-2

3.2

42.9

44.3

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120