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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3695159_3698952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3695159 - 3698952

Intron Length:

3794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTGCTCACACCA

Flanking Amino Acid:

SQTKIQPPSPAGSGSMQGPQ

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

0.81

0.8

80.6

31.4

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

40.6

-0.7

1.9

49.31

41.6

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120