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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3699161_3699724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3699161 - 3699724

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

GGATTTTGAGTT

Flanking Amino Acid:

SVKEIGGLTQVNKNKKWREL

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.7

82.8

23.2

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

0.63

72.9

42.2

Minor 5ss

26.6

-2.7

30.8

43.1

Minor BPS

46.5

-0.1

1.6

58.87

38.4

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120