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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3699935_3702152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3699935 - 3702152

Intron Length:

2218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CAGTCCTGATAT

Flanking Amino Acid:

GTPKAESKSKKSSSSTTTNE

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

36.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

79.3

0.66

0.7

31.9

Minor 5ss

37.6

-1.4

3.2

50.9

45.7

Minor BPS

48.2

-0

1.9

63.45

46.1

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120