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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3702263_3702348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3702263 - 3702348

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTGAATTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

ATTCTCTGAATT

Flanking Amino Acid:

MGGNMANNSAGMAASPEMMG

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

69.8

0.49

37.5

Major PPT

66.2

0.37

0.9

57.8

42.8

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

66.3

0.59

1.4

80.65

34.6

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120