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Intron Name: Anas_platyrhynchos_platyrhynchos_24_370424_370863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

370424 - 370863

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTATCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTGTAAATT

Flanking Amino Acid:

FKESDLSHVQNKSAFLCGVM

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

100

1.24

0.5

100

Major PPT

77.6

0.62

0.9

70.2

39.9

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

51.2

0.12

2.3

77.24

40.1

Associated Gene:

Gene:

HNRNPR

Ensembl Gene ID:

ENSAPLG00000003755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003871

353900 - 382318

28419