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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3706282_3721561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3706282 - 3721561

Intron Length:

15280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTGGCTGATCT

Flanking Amino Acid:

NLQSRPSSLPDLSGSIDDLP

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.1

0.56

68.6

Minor 5ss

29.4

-2.4

3.2

40.9

45.4

Minor BPS

48.9

-0

2.2

76.58

45.8

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120