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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3721676_3722883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3721676 - 3722883

Intron Length:

1208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

CTTGATGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTCTTGATG

Flanking Amino Acid:

YSQQRFPPPQELSQESFGSQ

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.6

46.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.7

0.6

72.8

41.9

Minor 5ss

41.9

-0.9

3.2

55.4

48.8

Minor BPS

70.1

0.49

1.3

70.56

36.9

Associated Gene:

Gene:

ARID1A

Ensembl Gene ID:

ENSAPLG00000010807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035050

3687157 - 3724264

37108

ENSAPLT00000011284

3687157 - 3724276

37120