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Intron Name: Anas_platyrhynchos_platyrhynchos_24_373385_382243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

373385 - 382243

Intron Length:

8859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCAGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGCTCCTGAATT

Flanking Amino Acid:

PELRRAGPAPHNKMANQVNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

85.2

0.79

0.8

82.8

27.4

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

66.9

0.61

1.4

76.24

40.3

Associated Gene:

Gene:

HNRNPR

Ensembl Gene ID:

ENSAPLG00000003755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003871

353900 - 382318

28419