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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3790180_3790395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3790180 - 3790395

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGAAT

U12 Branch Point Sequence:

GGTATGAGAATG

Flanking Amino Acid:

KTVEYLHSQGVVHRDLKPSN

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.8

38.7

Major BPS

49.1

-0

1.5

45.4

Major PPT

81.5

0.71

0.7

76.7

25.3

Minor 5ss

33.5

-1.9

2.8

34.2

41.4

Minor BPS

36.4

-1.1

2.1

39.29

37.6

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026085

3787458 - 3799202

11745

ENSAPLT00000041633

3788056 - 3827044

38989

ENSAPLT00000019406

3787458 - 3802788

15331

ENSAPLT00000037650

3787458 - 3821062

33605

ENSAPLT00000011391

3788056 - 3827044

38989

ENSAPLT00000032813

3787458 - 3821062

33605

ENSAPLT00000030890

3787458 - 3827044

39587

ENSAPLT00000046574

3787483 - 3806400

18918