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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3794251_3794813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3794251 - 3794813

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTACC

5'SS Class:

major

3'SS Sequence:

CTTTCCCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TACGTGTGACCT

Flanking Amino Acid:

ADWWSYGVLMFEMLTGSLPF

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

71.7

38.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

81.4

0.71

0.7

73.2

31.7

Minor 5ss

36.1

-1.6

2.9

43.4

37.9

Minor BPS

-0.6

2.3

56.77

45.9

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011391

3788056 - 3827044

38989

ENSAPLT00000032813

3787458 - 3821062

33605

ENSAPLT00000030890

3787458 - 3827044

39587

ENSAPLT00000046574

3787483 - 3806400

18918

ENSAPLT00000026085

3787458 - 3799202

11745

ENSAPLT00000041633

3788056 - 3827044

38989

ENSAPLT00000019406

3787458 - 3802788

15331

ENSAPLT00000037650

3787458 - 3821062

33605