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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3794957_3795078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3794957 - 3795078

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAC

5'SS Class:

major

3'SS Sequence:

GTCTCATACGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTGTCTCATAC

Flanking Amino Acid:

LDEEGHIKLTDFGLSKEAID

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

66.4

39.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

63.9

0.31

0.9

58.9

36.3

Minor 5ss

30.4

-2.2

3.4

45.6

Minor BPS

47.2

-0.2

1.9

63.32

42.2

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026085

3787458 - 3799202

11745

ENSAPLT00000041633

3788056 - 3827044

38989

ENSAPLT00000019406

3787458 - 3802788

15331

ENSAPLT00000037650

3787458 - 3821062

33605

ENSAPLT00000011391

3788056 - 3827044

38989

ENSAPLT00000032813

3787458 - 3821062

33605

ENSAPLT00000030890

3787458 - 3827044

39587

ENSAPLT00000046574

3787483 - 3806400

18918