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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3795823_3796446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3795823 - 3796446

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TCTCCCTTACCA

Flanking Amino Acid:

GDLFTRLSKEVMFTEEDVKF

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

83.2

30.8

Major BPS

77.9

0.69

78.3

31.3

Major PPT

74.2

0.55

0.8

68.6

30.3

Minor 5ss

32.5

-2

3.1

41.3

45.3

Minor BPS

68.8

0.59

1.6

76.69

40.5

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019406

3787458 - 3802788

15331

ENSAPLT00000037650

3787458 - 3821062

33605

ENSAPLT00000011391

3788056 - 3827044

38989

ENSAPLT00000032813

3787458 - 3821062

33605

ENSAPLT00000030890

3787458 - 3827044

39587

ENSAPLT00000046574

3787483 - 3806400

18918

ENSAPLT00000026085

3787458 - 3799202

11745

ENSAPLT00000041633

3788056 - 3827044

38989