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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3797800_3798920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3797800 - 3798920

Intron Length:

1121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAG

U12 Branch Point Sequence:

TAGTGCTCAGCT

Flanking Amino Acid:

KVLGQGSFGKVFLVRKITPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

57.4

0.18

1.6

57.4

49.1

Major PPT

78.6

0.64

0.8

76.8

31.9

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

47.9

-0

2.2

69.56

46.8

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019406

3787458 - 3802788

15331

ENSAPLT00000037650

3787458 - 3821062

33605

ENSAPLT00000011391

3788056 - 3827044

38989

ENSAPLT00000032813

3787458 - 3821062

33605

ENSAPLT00000030890

3787458 - 3827044

39587

ENSAPLT00000046574

3787483 - 3806400

18918

ENSAPLT00000026085

3787458 - 3799202

11745

ENSAPLT00000041633

3788056 - 3827044

38989