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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3799038_3801917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3799038 - 3801917

Intron Length:

2880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

CCCTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAA

U12 Branch Point Sequence:

ATATTCCCAATC

Flanking Amino Acid:

LPAPSQLSSPGEGVVKEINI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.3

82.1

37.7

Major BPS

58.9

0.22

1.1

61.7

34.2

Major PPT

85.2

0.79

0.7

83.1

25.2

Minor 5ss

37.6

-1.4

2.9

53.2

43.3

Minor BPS

-0

1.8

62.54

36.6

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019406

3787458 - 3802788

15331