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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3803981_3820534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3803981 - 3820534

Intron Length:

16554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTTAT

U12 Branch Point Sequence:

TATTGTTCCACA

Flanking Amino Acid:

PEESGNPPSKAKSDITWIEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

0.47

1.2

61.1

45.5

Major PPT

78.7

0.65

0.9

72.8

37.2

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

-0.3

2.3

64.37

42.3

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037650

3787458 - 3821062

33605

ENSAPLT00000030890

3787458 - 3827044

39587