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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3803981_3826981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3803981 - 3826981

Intron Length:

23001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTTAT

U12 Branch Point Sequence:

TATTGTTCCACA

Flanking Amino Acid:

NMELVHLDTEAKSDITWIEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.47

1.2

61.1

45.5

Major PPT

78.7

0.65

0.9

72.8

37.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

-0.3

2.3

64.37

42.3

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041633

3788056 - 3827044

38989