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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3820580_3826981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3820580 - 3826981

Intron Length:

6402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TGTGTGCTAACA

Flanking Amino Acid:

NMELVHLDTENGQAAPEESG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

89.2

0.88

0.6

84.3

23.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

-0.3

2.4

64.11

42.3

Associated Gene:

Gene:

RPS6KA1

Ensembl Gene ID:

ENSAPLG00000010872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030890

3787458 - 3827044

39587