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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3844374_3844813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3844374 - 3844813

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATTAC

5'SS Class:

strong_major

3'SS Sequence:

GGTGACTGTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTGATAACT

Flanking Amino Acid:

KGRSRLVLMKFEILFFIKFY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

76.9

27.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

62.2

0.28

1.1

53.5

45.7

Minor 5ss

34.4

-1.8

2.9

42.9

44.7

Minor BPS

60.2

0.4

2.3

88.42

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035956

3842994 - 3844960

1967