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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3844455_3844904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3844455 - 3844904

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAACAG

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TGTGTATTGACC

Flanking Amino Acid:

AENGDAKTDQAQKAEGAGDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

57.6

41.3

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

89.4

0.89

0.6

88.9

20.3

Minor 5ss

36.7

-1.5

3.1

46.9

48.4

Minor BPS

0.11

1.7

67.15

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037737

3844129 - 3845642

1514

ENSAPLT00000029564

3844129 - 3846322

2194