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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3845412_3845731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3845412 - 3845731

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTTTACTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTACTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.8

0.72

0.9

77.7

35.1

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

85.5

1.11

1.3

92.79

26.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029564

3844129 - 3846322

2194