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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3845762_3846119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3845762 - 3846119

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGACATTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.1

0.61

0.9

74.1

34.4

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

57.3

0.31

1.8

74.23

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029564

3844129 - 3846322

2194