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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3851837_3853494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3851837 - 3853494

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAA

U12 Branch Point Sequence:

CTGTTGGTAATC

Flanking Amino Acid:

VRLSDFLLWQTSHSCLVFQS

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

64.8

0.37

1.2

67.9

36.3

Major PPT

85.8

0.81

0.8

81.2

30.8

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

43.5

-0.5

2.5

56.54

43.3

Associated Gene:

Gene:

DHDDS

Ensembl Gene ID:

ENSAPLG00000008871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009250

3848187 - 3857270

9084