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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3854352_3854532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3854352 - 3854532

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTACTTTTAAGT

Flanking Amino Acid:

QAVLATRNYNKCFLNVCFAY

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

75.6

0.64

1.5

34.5

Major PPT

89.9

0.9

0.6

88.1

21.8

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

62.2

0.46

1.6

77.56

Associated Gene:

Gene:

DHDDS

Ensembl Gene ID:

ENSAPLG00000008871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009250

3848187 - 3857270

9084