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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3862509_3863609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3862509 - 3863609

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGAAT

U12 Branch Point Sequence:

TCCCCCTCGAAT

Flanking Amino Acid:

SLQKRRSKGDRCYNCGGLDH

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

68.2

Major BPS

57.2

0.18

1.4

67.3

37.8

Major PPT

74.8

0.56

0.7

68.5

Minor 5ss

31.4

-2.1

3.7

47.2

48.2

Minor BPS

49.5

0.05

1.7

66.2

44.3

Associated Gene:

Gene:

LIN28A

Ensembl Gene ID:

ENSAPLG00000016571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018039

3862295 - 3868175

5881