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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3863882_3868058_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3863882 - 3868058

Intron Length:

4177

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAGGAGAT

5'SS Class:

weak_major

3'SS Sequence:

GGGGTATCAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

GGGGTATCAGCA

Flanking Amino Acid:

CPEVCTEGWAPWCCGVGLGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.17

1.4

59.7

42.3

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

55.7

0.13

1.1

48.5

Minor 5ss

22.6

-3.2

4.4

42.7

45.5

Minor BPS

38.3

-0.8

1.8

42.01

38.7

Associated Gene:

Gene:

LIN28A

Ensembl Gene ID:

ENSAPLG00000016571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018039

3862295 - 3868175

5881