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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3886864_3887386_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3886864 - 3887386

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CGGGCGTTGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCGCCCCTCACG

Flanking Amino Acid:

TTEPCPADVPQEDEESFEKI

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

55.8

0.13

1.1

49.4

43.8

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

-0.6

2.1

46.2

45.9

Associated Gene:

Gene:

CRYBG2

Ensembl Gene ID:

ENSAPLG00000008864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009214

3884776 - 3892149

7374