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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3887435_3887521_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3887435 - 3887521

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGGGGT

5'SS Class:
strong_major

3'SS Sequence:
TCACCTCTCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTCAC

U12 Branch Point Sequence:
TCTGCTGTCACC

Flanking Amino Acid:
FEKINTRPGKIILFSEASFT

Intron Amino Acid Position:
694

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
1
69.5
41.1

Major BPS
62.6
0.31
1.2
66.7
39.9

Major PPT
73.6
0.53
0.8
65.1
36

Minor 5ss
37
-1.5
3.6
55.4
48.8

Minor BPS
45.3
-0.3
2.4
60.93
45.2

Associated Gene:

Gene:
CRYBG2

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3884776 - 3892149
7374