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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3896389_3897503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3896389 - 3897503

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCTGT

5'SS Class:

major

3'SS Sequence:

TTTGTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAG

U12 Branch Point Sequence:

CCCTTTTAGAGA

Flanking Amino Acid:

MQREGAAPTDMDLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

65.8

42.7

Major BPS

60.2

0.25

1.6

61.1

45.5

Major PPT

84.4

0.77

0.9

81.2

36.5

Minor 5ss

38.7

-1.3

3.4

55.4

48.8

Minor BPS

41.8

-0.6

1.8

43.85

39.8

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008939

3896376 - 3906957

10582