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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3898437_3899472_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3898437 - 3899472

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TGTGCATAGAAA

Flanking Amino Acid:

EKMKTLQKGEDAPDSSTAED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

74.7

0.61

65.9

40.9

Major PPT

87.5

0.84

0.6

22.6

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

43.7

-0.5

2.1

57.39

41.7

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026426

3896968 - 3906957

9990

ENSAPLT00000008939

3896376 - 3906957

10582