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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3899550_3900050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3899550 - 3900050

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAA

U12 Branch Point Sequence:

TGCTCTACAACA

Flanking Amino Acid:

QLQTQVWEMERFLNDYGLIW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

34.3

Major BPS

0.27

1.1

69.2

36.3

Major PPT

89.4

0.89

0.6

24.1

Minor 5ss

32.8

-2

41.8

Minor BPS

51.1

0.03

1.8

65.35

40.9

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026426

3896968 - 3906957

9990

ENSAPLT00000008939

3896376 - 3906957

10582