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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3902194_3903491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3902194 - 3903491

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTAATTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TCGGCCTTAATT

Flanking Amino Acid:

MRYPDGIPFQVTDKRDVVFQ

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.5

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

71.4

0.48

66.1

39.3

Minor 5ss

-1.8

3.3

48.8

Minor BPS

72.3

0.78

1.4

79.19

43.7

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026426

3896968 - 3906957

9990

ENSAPLT00000008939

3896376 - 3906957

10582