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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3903613_3904601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3903613 - 3904601

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTCC

5'SS Class:

major

3'SS Sequence:

TCTGCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACACAT

U12 Branch Point Sequence:

AAGTACTGCACA

Flanking Amino Acid:

SKVQETDEIPGPKPSSKQFL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.1

36.7

Major BPS

57.6

0.19

64.6

32.2

Major PPT

0.52

69.1

Minor 5ss

44.5

-0.6

2.9

44.7

Minor BPS

45.7

-0.3

57.19

41.5

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026426

3896968 - 3906957

9990

ENSAPLT00000008939

3896376 - 3906957

10582