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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3904706_3904913_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3904706 - 3904913

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGCG

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TTTTTTTTTCTG

Flanking Amino Acid:

IQDPVRATQQGSGGTWSSRE

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

65.2

39.1

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

73.7

0.53

69.2

46.1

Minor 5ss

36.8

-1.5

3.3

47.8

47.9

Minor BPS

40.9

-0.8

3.5

61.8

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026426

3896968 - 3906957

9990

ENSAPLT00000008939

3896376 - 3906957

10582